[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 5,024 items for (author: ren & y)

EMDB-18594:
Cryo-EM structure of E. coli cytochrome bo3 quinol oxidase assembled in peptidiscs
Method: single particle / : Gao Y, Zhang Y, Hakke S, Peters PJ, Ravelli RBG

PDB-8qqk:
Cryo-EM structure of E. coli cytochrome bo3 quinol oxidase assembled in peptidiscs
Method: single particle / : Gao Y, Zhang Y, Hakke S, Peters PJ, Ravelli RBG

EMDB-18609:
Cryo-EM structure of the light-driven sodium pump ErNaR in the pentameric form at pH 8.0
Method: single particle / : Kovalev K, Podoliak E, Lamm GHU, Marin E, Stetsenko A, Guskov A

EMDB-18610:
Cryo-EM structure of the light-driven sodium pump ErNaR in the pentameric form at pH 4.3
Method: single particle / : Kovalev K, Podoliak E, Lamm GHU, Marin E, Stetsenko A, Guskov A

PDB-8qqz:
Cryo-EM structure of the light-driven sodium pump ErNaR in the pentameric form at pH 8.0
Method: single particle / : Kovalev K, Podoliak E, Lamm GHU, Marin E, Stetsenko A, Guskov A

PDB-8qr0:
Cryo-EM structure of the light-driven sodium pump ErNaR in the pentameric form at pH 4.3
Method: single particle / : Kovalev K, Podoliak E, Lamm GHU, Marin E, Stetsenko A, Guskov A

EMDB-42464:
chEnv TTT protein in complex with 43A2 Fab
Method: single particle / : Ozorowski G, Lee WH, Ward AB

EMDB-42468:
chEnv TTT protein in complex with CM01A Fab
Method: single particle / : Ozorowski G, Lee WH, Ward AB

EMDB-34880:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 (apo)
Method: single particle / : Wei Y, Yu Z, Zhao Y

EMDB-34891:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 in complex with tetrandrine (TET)
Method: single particle / : Wei Y, Yu Z, Zhao Y

EMDB-34892:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 in complex with benidipine (BEN)
Method: single particle / : Wei Y, Yu Z, Zhao Y

PDB-8hlp:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 (apo)
Method: single particle / : Wei Y, Yu Z, Zhao Y

PDB-8hma:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 in complex with tetrandrine (TET)
Method: single particle / : Wei Y, Yu Z, Zhao Y

PDB-8hmb:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 in complex with benidipine (BEN)
Method: single particle / : Wei Y, Yu Z, Zhao Y

EMDB-18214:
Structure of CUL9-RBX1 ubiquitin E3 ligase complex - hexameric assembly
Method: single particle / : Hopf LVM, Horn-Ghetko D, Schulman BA

EMDB-18216:
Structure of CUL9-RBX1 ubiquitin E3 ligase complex in unneddylated and neddylated conformation - focused cullin dimer
Method: single particle / : Hopf LVM, Horn-Ghetko D, Schulman BA

EMDB-18217:
Structure of CUL9-RBX1 ubiquitin E3 ligase complex in unneddylated and neddylated conformation - focused on E2-like density
Method: single particle / : Hopf LVM, Horn-Ghetko D, Schulman BA

EMDB-18218:
Structure of CUL9-RBX1 ubiquitin E3 ligase complex in unneddylated and neddylated conformation - focused dimeric core
Method: single particle / : Hopf LVM, Horn-Ghetko D, Schulman BA

EMDB-18220:
Structure of the hexameric CUL9-RBX1 complex with deletion of CUL9 CPH domain
Method: single particle / : Hopf LVM, Horn-Ghetko D, Schulman BA

EMDB-18221:
Structure of the hexameric CUL9-RBX1 complex with deletion of CUL9 DOC domain
Method: single particle / : Hopf LVM, Horn-Ghetko D, Schulman BA

EMDB-18222:
Structure of the hexameric CUL9-RBX1 complex with deletion of CUL9 ARM9 domain
Method: single particle / : Hopf LVM, Horn-Ghetko D, Schulman BA

EMDB-18223:
Structure of the hexameric CUL9-RBX1 complex with deletion of CUL9 ARIH-RBR element
Method: single particle / : Hopf LVM, Horn-Ghetko D, Schulman BA

EMDB-19179:
Structure of CUL9-RBX1 ubiquitin E3 ligase complex in unneddylated conformation - symmetry expanded unneddylated dimer
Method: single particle / : Hopf LVM, Horn-Ghetko D, Prabu JR, Schulman BA

PDB-8q7e:
Structure of CUL9-RBX1 ubiquitin E3 ligase complex - hexameric assembly
Method: single particle / : Hopf LVM, Horn-Ghetko D, Schulman BA

PDB-8q7h:
Structure of CUL9-RBX1 ubiquitin E3 ligase complex in unneddylated and neddylated conformation - focused cullin dimer
Method: single particle / : Hopf LVM, Horn-Ghetko D, Schulman BA

PDB-8rhz:
Structure of CUL9-RBX1 ubiquitin E3 ligase complex in unneddylated conformation - symmetry expanded unneddylated dimer
Method: single particle / : Hopf LVM, Horn-Ghetko D, Prabu JR, Schulman BA

EMDB-43664:
Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines
Method: single particle / : Ferguson JA, Leon AN, Ward AB

EMDB-43665:
Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines (cH125 TTT)
Method: single particle / : Ferguson JA, Leon AN, Ward AB

EMDB-43666:
Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines (H2/1 GCN4)
Method: single particle / : Ferguson JA, Leon AN, Ward AB

EMDB-43668:
Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines (H5/1 GCN4)
Method: single particle / : Ferguson JA, Leon AN, Ward AB

EMDB-43669:
Triple tandem trimer immunogens for HIV-1 and influenza nucleic acid-based vaccines. H5 GCN4
Method: single particle / : Ferguson JA, Leon AN, Ward AB

EMDB-43705:
HIV-1 wild-type intasome core
Method: single particle / : Li M, Craigie R

EMDB-43756:
HIV-1 P5-IN intasome core
Method: single particle / : Li M, Craigie R

EMDB-43761:
HIV-1 intasome core assembled with wild-type integrase, 1F
Method: single particle / : Li M, Craigie R

PDB-8w09:
HIV-1 wild-type intasome core
Method: single particle / : Li M, Craigie R

PDB-8w2r:
HIV-1 P5-IN intasome core
Method: single particle / : Li M, Craigie R

PDB-8w34:
HIV-1 intasome core assembled with wild-type integrase, 1F
Method: single particle / : Li M, Craigie R

EMDB-37362:
CryoEM structure of human PI3K-alpha (P85/P110-H1047R) with QR-7909 binding at an allosteric site
Method: single particle / : Huang X, Ren X, Zhong W

EMDB-37363:
CryoEM structure of human PI3K-alpha (P85/P110-H1047R) with QR-8557 binding at an allosteric site
Method: single particle / : Huang X, Ren X, Zhong W

PDB-8w9a:
CryoEM structure of human PI3K-alpha (P85/P110-H1047R) with QR-7909 binding at an allosteric site
Method: single particle / : Huang X, Ren X, Zhong W

PDB-8w9b:
CryoEM structure of human PI3K-alpha (P85/P110-H1047R) with QR-8557 binding at an allosteric site
Method: single particle / : Huang X, Ren X, Zhong W

EMDB-41434:
Bottom cylinder of high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L, Kirst H, Kerfeld CA

EMDB-41435:
Central rod disk in C1 symmetry of high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L, Kirst H, Kerfeld CA

EMDB-41436:
Central rod disk in D3 symmetry of high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L, Kirst H, Kerfeld CA

EMDB-41463:
Synechocystis PCC 6803 Phycobilisome quenched by OCP, high resolution
Method: single particle / : Sauer PV, Sutter M, Cupellini L

EMDB-41475:
Top cylinder bound to OCP from high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L

EMDB-41585:
Rod from high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L

PDB-8to2:
Bottom cylinder of high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L

PDB-8to5:
Central rod disk in C1 symmetry of high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L

PDB-8tpj:
Top cylinder bound to OCP from high-resolution phycobilisome quenched by OCP (local refinement)
Method: single particle / : Sauer PV, Sutter M, Cupellini L

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more